edgePy.data_import package

Subpackages

• edgePy.data_import.mongodb package
  • Submodules
  • edgePy.data_import.mongodb.gene_functions module
  • edgePy.data_import.mongodb.mongo_import module
  • edgePy.data_import.mongodb.mongo_wrapper module
  • Module contents

Submodules

edgePy.data_import.data_import module

Skeleton class for importing files

edgePy.data_import.data_import.get_dataset_path(filename: Union[str, pathlib.Path]) → pathlib.Path

Return the filesystem path to the packaged data file.

Parameters:filename (str, pathlib.Path) – The full name of the packaged data file. Returns:The filesystem path to the packaged data file. Return type:path (pathlib.Path)

Examples >>> from edgePy.data_import.data_import import get_dataset_path >>> str(get_dataset_path(“GSE49712_HTSeq.txt.gz”)) # doctest:+ELLIPSIS ‘…/edgePy/data/GSE49712_HTSeq.txt.gz’

Module contents