Planned statistical tests

| statistical test | R src location | test link - python | libary name - python | Notes | |:—————–|—————-|——————–|—————————-|—| | Multiple exact binomial tests | edgeR/R/binomTest.R | https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.binom_test.html | scipy | | f test | edgeR/R/decidetestsDGE.R | https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.f.html | scipy | | Linear Modelling | lmFit and contrasts. fit | https://docs.scipy.org/doc/scipy-0.14.0/reference/generated/scipy.stats.linregress.html | scipy | Linear Regression is an option? | | Negative Binomial | | https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.nbinom.html | scipy | | | Z score of Binomial | zscoreNBinom | https://docs.scipy.org/doc/scipy/reference/generated/scipy.stats.zscore.html | scipy | Tentative | | GLM | | https://docs.pymc.io/notebooks/GLM-negative-binomial-regression.html | MC3 | Tentative |